| School Name | Grades | Address | Zip | Phone | County | Type | District Name |
| Ballington Academy for the Arts and Sciences | K-3 | 2298 Merrill Center Drive
El Centro, CA | 92243 | (760) 353-0140 | Imperial | charter | El Centro Elementary |
| Black's Academy | 1-12 | 1078 Skyview Avenue
El Centro, CA | 92243 | (580) 235-2786 | Imperial | private | |
| Calvary Chapel Christian School of El Centro | K-12 | 1923 Austin Road
El Centro, CA | 92243 | (760) 352-0336 | Imperial | private | |
| Central Union High School | 8-12 | 1001 Brighton Avenue
El Centro, CA | 92243 | (760) 336-4300 | Imperial | public | Central Union High |
| Christ Community | K-6 | 585 W Orange Ave
El Centro, CA | 92243 | (760) 337-9444 | Imperial | private | |
| De Anza Magnet School | K-7 | 1530 South Waterman Avenue
El Centro, CA | 92243 | (760) 352-9811 | Imperial | public | El Centro Elementary |
| Desert Garden Elementary School | K-6 | 1900 South Sixth Street
El Centro, CA | 92243 | (760) 352-2051 | Imperial | public | El Centro Elementary |
| Desert Oasis High (Continuation) School | 9-12 | 1302 South Third Street
El Centro, CA | 92243 | (760) 336-4555 | Imperial | public | Central Union High |
| Harding Elementary School | K-6 | 950 South Seventh Street
El Centro, CA | 92243 | (760) 352-4791 | Imperial | public | El Centro Elementary |
| Imagine Schools at Imperial Valley | n/a | 1150 North Imperial Avenue
El Centro, CA | 92243 | (602) 614-7764 | Imperial | charter | El Centro Elementary |
| Imperial County Special Education School | K-12 | 1398 Sperber Road
El Centro, CA | 92243 | (760) 312-6428 | Imperial | public | Imperial County Office of Education |
| Imperial Valley Home School Academy | n/a | 2370 Main Street
El Centro, CA | 92243 | (760) 352-5712 | Imperial | charter | El Centro Elementary |
| Imperial Valley Rop School | n/a | 687 State Street
El Centro, CA | 92243 | (760) 482-2600 | Imperial | public | Imperial Valley Rop |
| Kennedy Middle School | 6-8 | 900 North Sixth Street
El Centro, CA | 92243 | (760) 352-0444 | Imperial | public | El Centro Elementary |
| Lincoln Elementary School | K-5 | 200 North Twelfth Street
El Centro, CA | 92243 | (760) 352-3060 | Imperial | public | El Centro Elementary |
| Margaret Hedrick Elementary School | K-6 | 550 South Waterman Avenue
El Centro, CA | 92243 | (760) 352-4750 | Imperial | public | El Centro Elementary |
| Martin Luther King Jr Elementary School | K-5 | 1950 Villa Avenue
El Centro, CA | 92243 | (760) 337-6555 | Imperial | public | El Centro Elementary |
| McCabe Elementary School | K-8 | 701 West McCabe Road
El Centro, CA | 92243 | (760) 352-5443 | Imperial | public | McCabe Union Elementary |
| McKinley Elementary School | K-5 | 1177 North Eighth Street
El Centro, CA | 92243 | (760) 352-3225 | Imperial | public | El Centro Elementary |
| Meadows Elementary School | K-8 | 2059 Bowker Road
El Centro, CA | 92243 | (760) 352-7512 | Imperial | public | Meadows Union Elementary |
| Southwest High School | 9-12 | 2001 Ocotillo Drive
El Centro, CA | 92243 | (760) 336-4100 | Imperial | public | Central Union High |
| St. Mary's Catholic Elementary School | K-8 | 700 South Waterman Avenue
El Centro, CA | 92243 | (760) 352-7285 | Imperial | private | |
| Sunflower Elementary School | K-6 | 2450 Main Street
El Centro, CA | 92243 | (760) 337-4890 | Imperial | public | El Centro Elementary |
| Washington Elementary School | K-6 | 223 East First Street
El Centro, CA | 92243 | (760) 352-6611 | Imperial | public | El Centro Elementary |
| Wilson Junior High School | 6-8 | 600 South Wilson Avenue
El Centro, CA | 92243 | (760) 352-5341 | Imperial | public | El Centro Elementary |
