| School Name | Grades | Address | Zip | Phone | County | Type | District Name |
| George Nicoloff Elementary School | K-6 | 1777 Howard Avenue
San Ysidro, CA | 92173 | (619) 428-7100 | San Diego | public | South Bay Union Elementary |
| La Mirada Elementary School | 4-6 | 222 Avenida de la Madrid
San Ysidro, CA | 92173 | (619) 428-4424 | San Diego | public | San Ysidro Elementary |
| New Life Christian Academy | PK-12 | 3747 Sunset Ln
San Ysidro, CA | 92173 | (619) 428-0967 | San Diego | private | |
| Our Lady of Mount Carmel School | K-8 | 4141 Beyer Boulevard
San Ysidro, CA | 92173 | (619) 428-2091 | San Diego | private | |
| San Ysidro Middle School | 6-8 | 4345 Otay Mesa Road
San Ysidro, CA | 92173 | (619) 428-5551 | San Diego | public | San Ysidro Elementary |
| Smythe Elementary School | K-3 | 1880 Smythe Avenue
San Ysidro, CA | 92173 | (619) 428-4447 | San Diego | public | San Ysidro Elementary |
| Sunset Elementary School | K-6 | 3825 Sunset Lane
San Ysidro, CA | 92173 | (619) 428-1148 | San Diego | public | San Ysidro Elementary |
