| School Name | Grades | Address | Zip | Phone | County | Type | District Name |
| Alternatives Unlimited High School | 9-12 | 200 S 7th St
Palatka, FL | 32177 | (386) 312-4937 | Putnam | public | Putnam County Public Schools |
| Central Academy | K, 2-7, 10-11 | 322 N 10th St
Palatka, FL | 32177 | (386) 328-4420 | Putnam | private | |
| Eleanor H. Miller School | PK-12 | 156 Horseman Club Rd
Palatka, FL | 32177 | (386) 329-0595 | Putnam | public | Putnam County Public Schools |
| Hillcrest Academy | K-12 | 2009 President Street
Palatka, FL | 32177 | (386) 328-6514 | Putnam | private | |
| James A. Long Elementary School | PK-5 | 1400 Old Jacksonville Highway
Palatka, FL | 32177 | (386) 329-0575 | Putnam | public | Putnam County Public Schools |
| Kelley Smith Elementary School | PK-5 | 141 Kelley Smith School Rd
Palatka, FL | 32177 | (386) 329-0568 | Putnam | public | Putnam County Public Schools |
| Mellon Elementary School | PK-5 | 301 Mellon Rd
Palatka, FL | 32177 | (386) 329-0593 | Putnam | public | Putnam County Public Schools |
| Palatka High School | PK, 9-12 | 302 Mellon Rd
Palatka, FL | 32177 | (386) 329-0577 | Putnam | public | Putnam County Public Schools |
| Peniel Baptist Academy | PK-12 | 110 Peniel Church Rd
Palatka, FL | 32177 | (386) 328-1707 | Putnam | private | |
| Pentecostal Revival Academy | 2-12 | 115 Harrell Ln
Palatka, FL | 32177 | (386) 328-7388 | Putnam | private | |
| Putnam Christian School | 2, 6, 9-12 | P.O. Box 1703
Palatka, FL | 32178 | (386) 937-5519 | Putnam | private | |
| Putnam FLVS Franchise | 6-12 | 200 S 7th St
Palatka, FL | 32177 | (386) 312-4937 | Putnam | public | Putnam County Public Schools |
| Putnam Virtual Program | K-8 | 200 S 7th St
Palatka, FL | 32177 | (386) 329-0527 | Putnam | public | Putnam County Public Schools |
| River Christian Academy | PK-7 | 3111 Saint Johns Ave
Palatka, FL | 32177 | (386) 325-0951 | Putnam | private | |
| Robert H. Jenkins, Jr Middle School | 6-8 | 1100 N 19th St
Palatka, FL | 32177 | (386) 329-0588 | Putnam | public | Putnam County Public Schools |
| Temple Christian School | 2-3, 5-7, 9-12 | 908 N State Road 19
Palatka, FL | 32177 | (386) 328-2218 | Putnam | private | |
| The Children's Reading Center | K-5 | 7901 St. Johns Ave
Palatka, FL | 32177 | (386) 328-9990 | Putnam | charter | Putnam County Public Schools |
| W. H. Beasley Middle School | 6-8 | 1100 S 18th St
Palatka, FL | 32177 | (386) 329-0569 | Putnam | public | Putnam County Public Schools |
| William D. Moseley Elementary School | PK-5 | 1100 Husson Ave
Palatka, FL | 32177 | (386) 329-0562 | Putnam | public | Putnam County Public Schools |
