| School Name | Grades | Address | Zip | Phone | County | Type | District Name |
| Apostolic Academy | PK-12 | 2512 Rucker Rd
Junction City, KS | 66441 | (785) 238-6413 | Geary | private | |
| Eisenhower Elementary School | K-5 | 1625 St Marys Rd
Junction City, KS | 66441 | (785) 717-4340 | Geary | public | Geary County Schools USD 475 |
| Franklin Elementary School | K-5 | 410 West 2nd
Junction City, KS | 66441 | (785) 717-4380 | Geary | public | Geary County Schools USD 475 |
| Grandview Elementary School | K-5 | 109 East Grandview Dr
Junction City, KS | 66441 | (785) 717-4470 | Geary | public | Geary County Schools USD 475 |
| Junction City Middle School | 6-8 | 300 West 9th
Junction City, KS | 66441 | (785) 717-4400 | Geary | public | Geary County Schools USD 475 |
| Junction City Senior High School | 9-12 | 900 North Eisenhower
Junction City, KS | 66441 | (785) 717-4200 | Geary | public | Geary County Schools USD 475 |
| K.S. Hauge Alternative Education Center | 8-12 | 1833 Elmdale Ave
Junction City, KS | 66441 | (785) 717-4710 | Geary | public | Geary County Schools USD 475 |
| Lincoln Elementary School | K-5 | 300 North Lincoln
Junction City, KS | 66441 | (785) 717-4570 | Geary | public | Geary County Schools USD 475 |
| Sheridan Elementary School | K-5 | 429 West Ash
Junction City, KS | 66441 | (785) 717-4670 | Geary | public | Geary County Schools USD 475 |
| Spring Valley Elementary School | K-5 | 1601 Hickory Ln
Junction City, KS | 66441 | (785) 717-4790 | Geary | public | Geary County Schools USD 475 |
| St. Xavier Catholic School | PK-12 | 200 N Washington
Junction City, KS | 66441 | (785) 238-2841 | Geary | private | |
| St. Xavier Elementary School | PK-6 | 125 West 3rd Street
Junction City, KS | 66441 | (785) 238-3867 | Geary | private | |
| Washington Elementary School | K-5 | 1500 North Washington
Junction City, KS | 66441 | (785) 717-4690 | Geary | public | Geary County Schools USD 475 |
| Westwood Elementary School | K-5 | 1600 North Eisenhower Dr
Junction City, KS | 66441 | (785) 717-4150 | Geary | public | Geary County Schools USD 475 |
